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  1. Advisor
  2. snakemake
  3. functions
View all snakemake analysis

Most popular functions for snakemake

To help you get started, we’ve selected a few snakemake examples, based on popular ways it is used in public projects.

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  • 1

    snakemake.io.AnnotatedString

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  • 2

    snakemake.io.expand

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  • 3

    snakemake.io.glob_wildcards

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  • 4

    snakemake.io.Namedlist

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  • 5

    snakemake.logger

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  • 6

    snakemake.logger.logger.info

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  • 7

    snakemake.main

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  • 8

    snakemake.parser.parse

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  • 9

    snakemake.report

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  • 10

    snakemake.report.data_uri

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  • 11

    snakemake.shell

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  • 12

    snakemake.shell.shell

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  • 13

    snakemake.shell.shell.executable

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  • 14

    snakemake.snakemake

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  • 15

    snakemake.utils.listfiles

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  • 16

    snakemake.utils.read_job_properties

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  • 17

    snakemake.utils.report

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  • 18

    snakemake.utils.update_config

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  • 19

    snakemake.validator.__init__.Resource

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  • 20

    snakemake.workflow.Workflow

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