pydra-dcm2niix

v1.2.1

Provides a task interface for the popular dcm2niix DICOM to NIfTI converter For more information about how to use this package see README

Latest version published 1 year ago

License: Apache-2.0

PyPI

GitHub

Package Health Score

56 / 100

security
Security review needed
popularity
Small
maintenance
Inactive
community
Sustainable

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Popularity

Small

GitHub Stars: 879
Forks: 228
Contributors: 40

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package pydra-dcm2niix, we found that it has been starred 879 times.

Security

Security review needed

Security and license risk for latest version

Release Date: Jul 11, 2023
Direct Vulnerabilities: 0
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0
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0
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0
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Indirect Vulnerabilities: 0
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0
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0
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License Risk: 0
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1
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All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

Apache-2.0

Security Policy

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Maintenance

Inactive

Commit Frequency

Open Issues: 4
Open PR: 0
Last Release: 1 year ago
Last Commit: 3 months ago

Further analysis of the maintenance status of pydra-dcm2niix based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Inactive.

An important project maintenance signal to consider for pydra-dcm2niix is that it hasn't seen any new versions released to PyPI in the past 12 months, and could be considered as a discontinued project, or that which receives low attention from its maintainers.

As a healthy sign for on-going project maintenance, we found that the GitHub repository had at least 1 pull request or issue interacted with by the community.

Community

Sustainable

Readme: Yes
Contributing.md: No
Code of Conduct: No
Contributors: 40
Funding: No

With more than 10 contributors for the pydra-dcm2niix repository, this is possibly a sign for a growing and inviting community.

We found a way for you to contribute to the project! Looks like pydra-dcm2niix is missing a Code of Conduct.

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Package

Python Versions Compatibility: >=3.7

Age: 3 years
Latest Release: 1 year ago
Dependencies: 1 Direct / 15 Total
Versions: 6
Maintainers: 2
Wheels: OS Independent

Readme

Pydra Dcm2Niix Task

This repository contains Pydra task interface for the dcm2niix DICOM to NIfTI converter tool (https://github.com/rordenlab/dcm2niix).

Part of this effort is to establish a (mostly) declarative language for describing tasks that potentially have intricate rules for determining the availability and names from the choice of inputs.

Installation

pip install /path/to/pydra-dcm2niix/

Installation for developers

pip install -e /path/to/pydra-dcm2niix/[dev]

Basic Use

To run the dcm2niix task

from pydra.tasks.dcm2niix import Dcm2Niix

task = Dcm2Niix(in_dir='/path/to/dicom/dir', out_dir='/path/to/create/nifti/output')
result = task()

However, the converter task interface will typically be used as the first step within larger Pydra workflows

from pydra import Workflow
from pydra.tasks.dcm2niix import Dcm2Niix

my_workflow = Workflow(name='my_workflow', input_spec=['in_dicom'])

my_workflow.add(
    Dcm2Niix(name='converter', in_dir=my_workflow.lzin.in_dicom, out_dir='.'))
my_workflow.add(...)

my_workflow()

pydra-dcm2niix dependencies

pydra

FAQs

What is pydra-dcm2niix?

Provides a task interface for the popular dcm2niix DICOM to NIfTI converter. Visit Snyk Advisor to see a full health score report for pydra-dcm2niix, including popularity, security, maintenance & community analysis.

Is pydra-dcm2niix popular?

The python package pydra-dcm2niix receives a total of 605 weekly downloads. As such, pydra-dcm2niix popularity was classified as small. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is pydra-dcm2niix well maintained?

We found indications that pydra-dcm2niix is an Inactive project. See the full package health analysis to learn more about the package maintenance status.

Is pydra-dcm2niix safe to use?

While scanning the latest version of pydra-dcm2niix, we found that a security review is needed. A total of 0 vulnerabilities or license issues were detected. See the full security scan results.

Last updated on 3 November-2024, at 16:17 (UTC).

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