Package Health Score

75 / 100

security
No known security issues
popularity
Small
maintenance
Healthy
community
Sustainable

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bioinformatics
39

Popularity

Small

GitHub Stars: 97
Forks: 17
Contributors: 30

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package genomicsdb, we found that it has been starred 97 times.

Security

No known security issues

Security and license risk for latest version

Release Date: Dec 19, 2024
Direct Vulnerabilities: 0
C
0
H
0
M
0
L
Indirect Vulnerabilities: 0
C
0
H
0
M
0
L
License Risk: 0
H
0
M
0
L

All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

MIT

Security Policy

We found a way for you to contribute to the project! Looks like genomicsdb is missing a security policy.

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Maintenance

Healthy

Commit Frequency

Open Issues: 25
Open PR: 7
Last Release: 2 days ago
Last Commit: 6 days ago

Further analysis of the maintenance status of genomicsdb based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Healthy.

We found that genomicsdb demonstrates a positive version release cadence with at least one new version released in the past 3 months.

As a healthy sign for on-going project maintenance, we found that the GitHub repository had at least 1 pull request or issue interacted with by the community.

Community

Sustainable

Readme: Yes
Contributing.md: No
Code of Conduct: No
Contributors: 30
Funding: No

With more than 10 contributors for the genomicsdb repository, this is possibly a sign for a growing and inviting community.

We found a way for you to contribute to the project! Looks like genomicsdb is missing a Code of Conduct.

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Package

Python Versions Compatibility: >=3.9

Age: 5 years
Latest Release: 2 days ago
Dependencies: 0 Direct
Versions: 31
Maintainers: 0
Wheels: Linux, macOS

Readme

GenomicsDB-Python

Experimental Python 3 Bindings to the native GenomicsDB library. Only queries are supported for now. For importing vcf files into GenomicsDB, use the command line tools - vcf2genomicsdb or gatk GenomicsDBImport.

Installation : Only Linux and MacOS are currently supported

Install genomicsdb binary wheels from PyPi with pip:

pip install genomicsdb

Or explicitly from a source distribution

# Download the source distribution from https://pypi.org/project/genomicsdb/#files as genomicsdb.source.tar.gz
tar xvf genomicsdb.source.tar.gz
cd genomicsdb-
python setup.py install

Development

See instructions for local builds and running tests.

FAQs

What is genomicsdb?

Experimental Python Bindings for querying GenomicsDB. Visit Snyk Advisor to see a full health score report for genomicsdb, including popularity, security, maintenance & community analysis.

Is genomicsdb popular?

The python package genomicsdb receives a total of 1,098 weekly downloads. As such, genomicsdb popularity was classified as small. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is genomicsdb well maintained?

We found that genomicsdb demonstrated a healthy version release cadence and project activity. It has a community of 30 open source contributors collaborating on the project. See the full package health analysis to learn more about the package maintenance status.

Is genomicsdb safe to use?

The python package genomicsdb was scanned for known vulnerabilities and missing license, and no issues were found. Thus the package was deemed as safe to use. See the full health analysis review.

Last updated on 21 December-2024, at 10:09 (UTC).

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genomicsdb

Experimental Python Bindings for querying GenomicsDB For more information about how to use this package see README

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Security

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Maintenance

Commit Frequency

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Package

Readme

GenomicsDB-Python

Installation : Only Linux and MacOS are currently supported

Development

FAQs

What is genomicsdb?

Is genomicsdb popular?

Is genomicsdb well maintained?

Is genomicsdb safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Fix identified vulnerabilities

Monitor for new issues

Package Health Score

Explore Similar Packages

Direct Usage Popularity

Security and license risk for latest version

Commit Frequency

Embed Package Health Score Badge

Keep your project healthy

Check your requirements.txt

Snyk Vulnerability Scanner

Readme

GenomicsDB-Python

Installation : Only Linux and MacOS are currently supported

Development

FAQs

What is genomicsdb?

Is genomicsdb popular?

Is genomicsdb well maintained?

Is genomicsdb safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Source Code

Open Source

Container

Config

Fix identified vulnerabilities

Monitor for new issues