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A mapping from branch name to flat numpy array or awkward VirtualArray
methods : dict, optional
A mapping from collection name to class deriving from `awkward.array.objects.Methods`
that implements additional mixins
metadata : dict, optional
Arbitrary metadata to embed in this NanoEvents table
Returns a NanoEvents object
'''
arrays = dict(arrays)
for k in arrays:
if isinstance(arrays[k], awkward.VirtualArray):
pass
elif isinstance(arrays[k], numpy.ndarray):
value = arrays[k]
arrays[k] = awkward.VirtualArray(lambda: value, type=awkward.type.ArrayType(len(arrays[k]), arrays[k].dtype))
print(arrays[k])
else:
raise ValueError("The array %s : %r is not a valid type" % (k, arrays[k]))
events = cls.named('event')
collections = {k.split('_')[0] for k in arrays.keys()}
collections -= {k for k in collections if k.startswith('n') and k[1:] in collections}
allmethods = {}
allmethods.update(collection_methods)
if methods is not None:
allmethods.update(methods)
for name in collections:
methods = allmethods.get(name, None)
events.contents[name] = NanoCollection.from_arrays(arrays, name, methods)
for name in events.columns:
# soft hasattr via type, to prevent materialization
if isinstance(arrayn, awkward.array.objects.ObjectArray) and not isinstance(arrayn, awkward.array.objects.StringArray):
arrayn = arrayn.content
if not isinstance(tpen, (numpy.dtype, str, bytes, awkward.type.Type)):
tpen = awkward.type.fromarray(arrayn).to
if isinstance(tpen, numpy.dtype):
columns.append(colsn)
tmp = arrayn
elif isinstance(tpen, type) and issubclass(tpen, (str, bytes)):
columns.append(colsn)
tmp = arrayn
elif isinstance(tpen, awkward.type.ArrayType) and tpen.takes == numpy.inf:
tmp = JaggedArray(arrayn.starts, arrayn.stops, recurse(arrayn.content, tpen.to, colsn, True))
elif isinstance(tpen, awkward.type.TableType):
tmp = recurse(arrayn, tpen, colsn, True)
elif isinstance(tpen, awkward.type.OptionType) and isinstance(arrayn.content, numpy.ndarray):
columns.append(colsn)
tmp = numpy.ma.MaskedArray(arrayn.content, arrayn.boolmask(maskedwhen=True))
else:
raise ValueError("this array has unflattenable substructure:\n\n{0}".format(str(tpen)))
if isinstance(tmp, awkward.array.jagged.JaggedArray):
if isinstance(tmp.content, awkward.array.jagged.JaggedArray):
unflattened = tmp
tmp = tmp.flatten(axis=1)
if starts is None:
starts, stops = tmp.starts, tmp.stops
raise TypeError("chunksize must be a positive integer")
_checkoptions(options)
awkwardlib = awkward.util.awkwardlib(awkwardlib)
fillable = UnknownFillable(awkwardlib)
count = 0
tpe = None
for obj in iterable:
fillable = fillable.append(obj, typeof(obj))
count += 1
if count == chunksize:
out = fillable.finalize(**options)
outtpe = awkward.type.fromarray(out).to
if tpe is None:
tpe = outtpe
elif tpe != outtpe:
raise TypeError("data type has changed after the first chunk (first chunk is not large enough to see the full generality of the data):\n\n{0}\n\nversus\n\n{1}".format(awkward.type._str(tpe, indent=" "), awkward.type._str(outtpe, indent=" ")))
yield out
fillable.clear()
count = 0
if count != 0:
out = fillable.finalize(**options)
outtpe = awkward.type.fromarray(out).to
if tpe is None:
tpe = outtpe
elif tpe != outtpe:
raise TypeError("data type has changed after the first chunk (first chunk is not large enough to see the full generality of the data):\n\n{0}\n\nversus\n\n{1}".format(awkward.type._str(tpe, indent=" "), awkward.type._str(outtpe, indent=" ")))
def _finalize(self, name, events):
del self['mass']
super(Photon, self)._finalize(name, events)
if 'Electron' in events.columns:
electrons = events['Electron']
reftype = awkward.type.ArrayType(float('inf'), awkward.type.OptionType(electrons.type.to.to))
reftype.check = False
embedded_electron = type(electrons)(
self._lazy_crossref,
args=(self._getcolumn('electronIdx'), electrons),
type=reftype,
)
embedded_electron.__doc__ = electrons.__doc__
self['matched_electron'] = embedded_electron
del self['electronIdx']
def _finalize(self, name, events):
parent_type = awkward.type.ArrayType(float('inf'), awkward.type.OptionType(events.GenPart.type.to.to))
parent_type.check = False # break recursion
gen_parent = type(events.GenPart)(
self._lazy_crossref,
args=(self._getcolumn('genPartIdxMother'), events.GenPart),
type=parent_type,
)
gen_parent.__doc__ = self.__doc__
self['parent'] = gen_parent
self.type.check = False
del self['genPartIdxMother']
def recurse(array, tpe, cols, seriously):
if isinstance(tpe, awkward.type.TableType):
starts, stops = None, None
out, deferred, unflattened = None, {}, None
for n in tpe.columns:
if not isinstance(n, str):
raise ValueError("column names must be strings")
tpen = tpe[n]
colsn = cols + (n,) if seriously else cols
if isinstance(tpen, awkward.type.OptionType):
array = array.content
tpen = tpen.type
if isinstance(tpen, numpy.dtype):
columns.append(colsn)
tmp = array[n]
elif isinstance(tpen, type) and issubclass(tpen, (str, bytes)):
columns.append(colsn)
tmp = array[n]
elif isinstance(tpen, awkward.type.ArrayType) and tpen.takes == numpy.inf:
tmp = JaggedArray(array[n].starts, array[n].stops, recurse(array[n].content, tpen.to, colsn, True))
elif isinstance(tpen, awkward.type.TableType):
tmp = recurse(array[n], tpen, colsn, True)